Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col5a1O88207 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col5a1O88207 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col5a1O88207 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.06□□□□□ -0.48
Col5a1O88207 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col5a1O88207 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col5a1O88207 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Gm11222-201ENSMUST00000119005 738 ntBASIC12.05□□□□□ -0.48
Col5a1O88207 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.05□□□□□ -0.48
Col5a1O88207 Gm5781-201ENSMUST00000219792 443 ntBASIC12.05□□□□□ -0.48
Col5a1O88207 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col5a1O88207 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col5a1O88207 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.05□□□□□ -0.48
Col5a1O88207 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col5a1O88207 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Col5a1O88207 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.05□□□□□ -0.48
Col5a1O88207 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.05□□□□□ -0.48
Col5a1O88207 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.05□□□□□ -0.48
Col5a1O88207 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col5a1O88207 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.04□□□□□ -0.48
Col5a1O88207 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.04□□□□□ -0.48
Col5a1O88207 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.04□□□□□ -0.48
Col5a1O88207 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.04□□□□□ -0.48
Col5a1O88207 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.04□□□□□ -0.48
Col5a1O88207 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.04□□□□□ -0.48
Col5a1O88207 Morn2-202ENSMUST00000227729 656 ntBASIC12.04□□□□□ -0.48
Col5a1O88207 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col5a1O88207 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Col5a1O88207 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.04□□□□□ -0.48
Col5a1O88207 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.04□□□□□ -0.48
Col5a1O88207 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Col5a1O88207 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Col5a1O88207 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
Col5a1O88207 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Gm14130-201ENSMUST00000118417 987 ntBASIC12.04□□□□□ -0.48
Col5a1O88207 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Col5a1O88207 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.04□□□□□ -0.48
Col5a1O88207 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Gm18584-201ENSMUST00000203098 964 ntBASIC12.04□□□□□ -0.48
Col5a1O88207 Gm4768-201ENSMUST00000206199 686 ntBASIC12.04□□□□□ -0.48
Col5a1O88207 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Col5a1O88207 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col5a1O88207 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col5a1O88207 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms