Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mir3102-201ENSMUST00000175555 104 ntBASIC17.26■□□□□ 0.35
Ubr1O70481 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC17.26■□□□□ 0.35
Ubr1O70481 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Ubr1O70481 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ubr1O70481 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ubr1O70481 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm13665-201ENSMUST00000120830 528 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 Gm12715-201ENSMUST00000121430 1128 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 Gm25668-201ENSMUST00000157700 129 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm38092-201ENSMUST00000195600 653 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm18615-201ENSMUST00000222919 1031 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ubr1O70481 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ubr1O70481 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ubr1O70481 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ubr1O70481 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ubr1O70481 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC17.25■□□□□ 0.35
Ubr1O70481 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm23363-201ENSMUST00000175024 79 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC17.25■□□□□ 0.35
Ubr1O70481 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 Rps4l-202ENSMUST00000204242 789 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 AC166095.1-201ENSMUST00000223731 1241 ntBASIC17.25■□□□□ 0.35
Ubr1O70481 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubr1O70481 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ubr1O70481 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ubr1O70481 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Ubr1O70481 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.24■□□□□ 0.35
Ubr1O70481 Gm13492-201ENSMUST00000119772 665 ntBASIC17.24■□□□□ 0.35
Ubr1O70481 Gm5597-201ENSMUST00000182353 1193 ntBASIC17.24■□□□□ 0.35
Ubr1O70481 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Ubr1O70481 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Daam2-202ENSMUST00000224595 1926 ntBASIC17.24■□□□□ 0.35
Ubr1O70481 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.24■□□□□ 0.35
Ubr1O70481 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubr1O70481 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.23■□□□□ 0.35
Ubr1O70481 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.23■□□□□ 0.35
Ubr1O70481 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ubr1O70481 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ubr1O70481 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Gm28386-201ENSMUST00000189147 1849 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ubr1O70481 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms