Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pde6dO55057 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.69□□□□□ -0.7
Pde6dO55057 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pde6dO55057 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pde6dO55057 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.68□□□□□ -0.7
Pde6dO55057 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Pde6dO55057 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.68□□□□□ -0.7
Pde6dO55057 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.68□□□□□ -0.7
Pde6dO55057 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.68□□□□□ -0.7
Pde6dO55057 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.68□□□□□ -0.7
Pde6dO55057 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.68□□□□□ -0.7
Pde6dO55057 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pde6dO55057 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pde6dO55057 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pde6dO55057 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pde6dO55057 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pde6dO55057 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Pde6dO55057 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pde6dO55057 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pde6dO55057 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Pde6dO55057 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.67□□□□□ -0.7
Pde6dO55057 Gm10231-201ENSMUST00000181584 441 ntBASIC10.67□□□□□ -0.7
Pde6dO55057 Gm27704-201ENSMUST00000185094 107 ntBASIC10.67□□□□□ -0.7
Pde6dO55057 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.67□□□□□ -0.7
Pde6dO55057 Gm10175-202ENSMUST00000208752 441 ntBASIC10.67□□□□□ -0.7
Pde6dO55057 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.67□□□□□ -0.7
Pde6dO55057 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Pde6dO55057 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pde6dO55057 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pde6dO55057 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.67□□□□□ -0.7
Pde6dO55057 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pde6dO55057 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pde6dO55057 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.66□□□□□ -0.7
Pde6dO55057 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pde6dO55057 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms