Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.44□□□□□ -0.58
Cxcl13O55038 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.44□□□□□ -0.58
Cxcl13O55038 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Gm43818-201ENSMUST00000200605 466 ntBASIC11.44□□□□□ -0.58
Cxcl13O55038 Gm43630-201ENSMUST00000201550 776 ntBASIC11.44□□□□□ -0.58
Cxcl13O55038 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Gm40466-201ENSMUST00000212174 422 ntBASIC11.44□□□□□ -0.58
Cxcl13O55038 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.44□□□□□ -0.58
Cxcl13O55038 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl13O55038 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl13O55038 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm12203-201ENSMUST00000118235 598 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm12384-201ENSMUST00000119228 919 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm12209-201ENSMUST00000120089 596 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Mir1938-201ENSMUST00000158746 100 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm27331-201ENSMUST00000183705 60 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm29705-201ENSMUST00000212598 474 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm16372-201ENSMUST00000073088 450 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.43□□□□□ -0.58
Cxcl13O55038 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl13O55038 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl13O55038 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.42□□□□□ -0.58
Cxcl13O55038 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms