Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pkd1O08852 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pkd1O08852 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pkd1O08852 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pkd1O08852 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pkd1O08852 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pkd1O08852 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC8.29□□□□□ -1.08
Pkd1O08852 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pkd1O08852 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm11941-201ENSMUST00000119904 610 ntBASIC8.29□□□□□ -1.08
Pkd1O08852 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pkd1O08852 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC8.29□□□□□ -1.08
Pkd1O08852 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC8.29□□□□□ -1.08
Pkd1O08852 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm45925-201ENSMUST00000218882 744 ntBASIC8.29□□□□□ -1.08
Pkd1O08852 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pkd1O08852 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC8.29□□□□□ -1.08
Pkd1O08852 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC8.29□□□□□ -1.08
Pkd1O08852 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC8.29□□□□□ -1.08
Pkd1O08852 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pkd1O08852 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC8.29□□□□□ -1.08
Pkd1O08852 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC8.29□□□□□ -1.08
Pkd1O08852 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC8.29□□□□□ -1.08
Pkd1O08852 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 Rn7s6-201ENSMUST00000175005 291 ntBASIC8.29□□□□□ -1.08
Pkd1O08852 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC8.29□□□□□ -1.08
Pkd1O08852 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.29□□□□□ -1.08
Pkd1O08852 AC166344.1-202ENSMUST00000224139 234 ntBASIC8.29□□□□□ -1.08
Pkd1O08852 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pkd1O08852 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
Pkd1O08852 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 CT009713.8-201ENSMUST00000225448 560 ntBASIC8.28□□□□□ -1.08
Pkd1O08852 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC8.28□□□□□ -1.08
Pkd1O08852 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Pkd1O08852 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
Pkd1O08852 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 AC091458.1-201ENSMUST00000220902 1361 ntBASIC8.28□□□□□ -1.08
Pkd1O08852 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Gm14644-201ENSMUST00000116671 647 ntBASIC8.28□□□□□ -1.08
Pkd1O08852 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC8.28□□□□□ -1.08
Pkd1O08852 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Gm28882-201ENSMUST00000185504 314 ntBASIC8.28□□□□□ -1.08
Pkd1O08852 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC8.28□□□□□ -1.08
Pkd1O08852 Gm19994-201ENSMUST00000217086 586 ntBASIC8.28□□□□□ -1.08
Pkd1O08852 Gzmn-202ENSMUST00000225535 989 ntBASIC8.28□□□□□ -1.08
Pkd1O08852 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Pkd1O08852 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pkd1O08852 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms