Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm10553J3QPF1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gm12490-201ENSMUST00000120255 560 ntBASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gm26464-201ENSMUST00000157094 305 ntBASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gm7653-201ENSMUST00000214567 508 ntBASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.36□□□□□ -0.75
Gm10553J3QPF1 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10553J3QPF1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Mir7654-201ENSMUST00000185082 70 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms