Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Gm3727J3QM54 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3727J3QM54 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.5□□□□□ -0.57
Gm3727J3QM54 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.5□□□□□ -0.57
Gm3727J3QM54 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3727J3QM54 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Gm7230-201ENSMUST00000173026 815 ntBASIC11.49□□□□□ -0.57
Gm3727J3QM54 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.49□□□□□ -0.57
Gm3727J3QM54 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3727J3QM54 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.48□□□□□ -0.57
Gm3727J3QM54 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.48□□□□□ -0.57
Gm3727J3QM54 Gm15483-201ENSMUST00000120338 456 ntBASIC11.48□□□□□ -0.57
Gm3727J3QM54 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.48□□□□□ -0.57
Gm3727J3QM54 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.48□□□□□ -0.57
Gm3727J3QM54 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.48□□□□□ -0.57
Gm3727J3QM54 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.48□□□□□ -0.57
Gm3727J3QM54 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gm3727J3QM54 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms