Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Mir6927-201ENSMUST00000184494 71 ntBASIC12.73□□□□□ -0.37
Colca2F8VPY8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Gm6458-201ENSMUST00000211573 635 ntBASIC12.73□□□□□ -0.37
Colca2F8VPY8 Gm29787-201ENSMUST00000222129 849 ntBASIC12.73□□□□□ -0.37
Colca2F8VPY8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.72□□□□□ -0.37
Colca2F8VPY8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Gm2546-201ENSMUST00000182630 991 ntBASIC12.72□□□□□ -0.37
Colca2F8VPY8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Gm8885-201ENSMUST00000189382 598 ntBASIC12.72□□□□□ -0.37
Colca2F8VPY8 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.72□□□□□ -0.37
Colca2F8VPY8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.72□□□□□ -0.37
Colca2F8VPY8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.72□□□□□ -0.37
Colca2F8VPY8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Colca2F8VPY8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Gm22121-201ENSMUST00000175148 54 ntBASIC12.71□□□□□ -0.37
Colca2F8VPY8 Gm25732-201ENSMUST00000175168 60 ntBASIC12.71□□□□□ -0.37
Colca2F8VPY8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.71□□□□□ -0.37
Colca2F8VPY8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Colca2F8VPY8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.71□□□□□ -0.38
Colca2F8VPY8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Colca2F8VPY8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms