Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Gm9719-201ENSMUST00000162765 543 ntBASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Gm27397-201ENSMUST00000184997 107 ntBASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Gm18766-201ENSMUST00000189811 808 ntBASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh1F7BJK1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Rubie-203ENSMUST00000227803 2430 ntBASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Gm6916-202ENSMUST00000205523 195 ntBASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Dupd1-202ENSMUST00000224735 548 ntBASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh1F7BJK1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
Pcdh1F7BJK1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Gm15678-201ENSMUST00000117573 960 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms