Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm5884-201ENSMUST00000036712 1479 ntBASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Gm27023-201ENSMUST00000182372 285 ntBASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Gm8856-201ENSMUST00000185254 1144 ntBASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 AC154680.1-201ENSMUST00000224376 859 ntBASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hfm1D3Z4R1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Hfm1D3Z4R1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Gm8385-201ENSMUST00000058999 643 ntBASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hfm1D3Z4R1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Gm8099-201ENSMUST00000200510 742 ntBASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Daam2-202ENSMUST00000224595 1926 ntBASIC18.69■□□□□ 0.58
Hfm1D3Z4R1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hfm1D3Z4R1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Gm13492-201ENSMUST00000119772 665 ntBASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Gm38092-201ENSMUST00000195600 653 ntBASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 AC123665.1-201ENSMUST00000228204 438 ntBASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms