Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gm6652-201ENSMUST00000186414 1070 ntBASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gm5950-201ENSMUST00000213337 772 ntBASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Gm13570-201ENSMUST00000140763 309 ntBASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Gm27341-201ENSMUST00000183570 106 ntBASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.09■□□□□ 0.33
Scn7aB1AYL1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn7aB1AYL1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn7aB1AYL1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm14028-201ENSMUST00000117434 479 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm24990-201ENSMUST00000157406 323 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm24845-201ENSMUST00000158034 109 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm5904-201ENSMUST00000210286 865 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 AC125209.1-201ENSMUST00000225812 766 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm15547-201ENSMUST00000122152 333 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms