Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.86□□□□□ -0.67
Chd6A3KFM7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.86□□□□□ -0.67
Chd6A3KFM7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.86□□□□□ -0.67
Chd6A3KFM7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.86□□□□□ -0.67
Chd6A3KFM7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.86□□□□□ -0.67
Chd6A3KFM7 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd6A3KFM7 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd6A3KFM7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.85□□□□□ -0.67
Chd6A3KFM7 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Gm14274-201ENSMUST00000117182 615 ntBASIC10.85□□□□□ -0.67
Chd6A3KFM7 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.85□□□□□ -0.67
Chd6A3KFM7 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.85□□□□□ -0.67
Chd6A3KFM7 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms