Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a3A2ACT7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a3A2ACT7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm6023-201ENSMUST00000118217 606 ntBASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.15□□□□□ -0.3
Col9a3A2ACT7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm2231-201ENSMUST00000125661 612 ntBASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.15□□□□□ -0.3
Col9a3A2ACT7 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a3A2ACT7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col9a3A2ACT7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Col9a3A2ACT7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col9a3A2ACT7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a3A2ACT7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a3A2ACT7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a3A2ACT7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a3A2ACT7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a3A2ACT7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a3A2ACT7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col9a3A2ACT7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms