Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Gm14701-201ENSMUST00000117156 348 ntBASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Gm12585-201ENSMUST00000117307 290 ntBASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Gm25948-201ENSMUST00000175334 112 ntBASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Grk6-205ENSMUST00000224653 2976 ntBASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc194A0A140LIT1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Gm24420-201ENSMUST00000176676 59 ntBASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Gm3436-201ENSMUST00000179930 840 ntBASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc194A0A140LIT1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms