Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Thap2-203ENSMUST00000218989 527 ntBASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Mir5126-201ENSMUST00000175513 77 ntBASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms