Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Gm33142-201ENSMUST00000193913 867 ntBASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Trav7n-4A0A075B620 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Gm14859-201ENSMUST00000117752 357 ntBASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Gm15173-201ENSMUST00000122049 433 ntBASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms