Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm14719-201ENSMUST00000121891 340 ntBASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm25925-201ENSMUST00000158314 306 ntBASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.59□□□□□ -0.23
H2afb2S4R1M3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
H2afb2S4R1M3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb2S4R1M3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb2S4R1M3 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms