Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1bQ9Z2C6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Upk1bQ9Z2C6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Upk1bQ9Z2C6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Upk1bQ9Z2C6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Upk1bQ9Z2C6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk1bQ9Z2C6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms