Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Gm6912-201ENSMUST00000117218 544 ntBASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Gm12091-201ENSMUST00000146791 830 ntBASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Clcf1Q9QZM3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clcf1Q9QZM3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Clcf1Q9QZM3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clcf1Q9QZM3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clcf1Q9QZM3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Gm18905-201ENSMUST00000205454 928 ntBASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Clcf1Q9QZM3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms