Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Gm11424-201ENSMUST00000121929 829 ntBASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Gm6916-202ENSMUST00000205523 195 ntBASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Gm6218-201ENSMUST00000219812 628 ntBASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubb3Q9ERD7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Gm5745-201ENSMUST00000183748 313 ntBASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb3Q9ERD7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms