Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgn3Q9DCB1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Gm15678-201ENSMUST00000117573 960 ntBASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn3Q9DCB1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Gm16198-201ENSMUST00000118766 670 ntBASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Gm12350-201ENSMUST00000121208 462 ntBASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms