Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
U2af1Q9D883 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
U2af1Q9D883 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
U2af1Q9D883 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.83■□□□□ 0.45
U2af1Q9D883 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
U2af1Q9D883 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
U2af1Q9D883 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
U2af1Q9D883 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.83■□□□□ 0.45
U2af1Q9D883 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.83■□□□□ 0.45
U2af1Q9D883 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
U2af1Q9D883 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
U2af1Q9D883 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
U2af1Q9D883 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.83■□□□□ 0.45
U2af1Q9D883 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.83■□□□□ 0.44
U2af1Q9D883 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
U2af1Q9D883 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Gm18187-201ENSMUST00000196476 984 ntBASIC17.83■□□□□ 0.44
U2af1Q9D883 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
U2af1Q9D883 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2af1Q9D883 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.83■□□□□ 0.44
U2af1Q9D883 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Mir1894-201ENSMUST00000122802 81 ntBASIC17.82■□□□□ 0.44
U2af1Q9D883 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
U2af1Q9D883 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2af1Q9D883 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
U2af1Q9D883 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.81■□□□□ 0.44
U2af1Q9D883 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
U2af1Q9D883 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
U2af1Q9D883 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.81■□□□□ 0.44
U2af1Q9D883 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.81■□□□□ 0.44
U2af1Q9D883 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.81■□□□□ 0.44
U2af1Q9D883 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
U2af1Q9D883 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
U2af1Q9D883 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
U2af1Q9D883 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
U2af1Q9D883 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
U2af1Q9D883 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms