Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm12485-201ENSMUST00000119641 291 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm11918-201ENSMUST00000121660 179 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm12138-201ENSMUST00000122180 951 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Mir7654-201ENSMUST00000185082 70 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps28Q9D1C8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Gm15376-201ENSMUST00000122258 783 ntBASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps28Q9D1C8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Gm26464-201ENSMUST00000157094 305 ntBASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Gm45384-201ENSMUST00000210451 277 ntBASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps28Q9D1C8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms