Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssr1Q9CY50 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssr1Q9CY50 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ssr1Q9CY50 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ssr1Q9CY50 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssr1Q9CY50 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssr1Q9CY50 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssr1Q9CY50 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssr1Q9CY50 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Gm25287-201ENSMUST00000103846 110 ntBASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Gm22918-201ENSMUST00000103855 110 ntBASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.79□□□□□ -0.04
Ssr1Q9CY50 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.79□□□□□ -0.04
Ssr1Q9CY50 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Gm9719-201ENSMUST00000162765 543 ntBASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.78□□□□□ -0.04
Ssr1Q9CY50 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssr1Q9CY50 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Gm18027-201ENSMUST00000218947 619 ntBASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms