Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 B9d1os-201ENSMUST00000137010 674 ntBASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Gm18584-201ENSMUST00000203098 964 ntBASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.83□□□□□ -0.2
Cldnd1Q9CQX5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gm11637-201ENSMUST00000120601 592 ntBASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gm12363-201ENSMUST00000122250 668 ntBASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldnd1Q9CQX5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm10434-201ENSMUST00000101158 471 ntBASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm37986-201ENSMUST00000193285 383 ntBASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm4768-201ENSMUST00000206199 686 ntBASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms