Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Gm13365-201ENSMUST00000121188 973 ntBASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Mir6990-201ENSMUST00000183724 91 ntBASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Gm27397-201ENSMUST00000184997 107 ntBASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Gm43125-201ENSMUST00000201724 730 ntBASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Ska1Q9CPV1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ska1Q9CPV1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ska1Q9CPV1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ska1Q9CPV1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ska1Q9CPV1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 AA543401-201ENSMUST00000164248 1269 ntBASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms