Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm11964-201ENSMUST00000120982 444 ntBASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm37230-201ENSMUST00000194491 818 ntBASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col25a1Q99MQ5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Gm11222-201ENSMUST00000119005 738 ntBASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col25a1Q99MQ5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col25a1Q99MQ5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col25a1Q99MQ5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col25a1Q99MQ5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col25a1Q99MQ5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.02□□□□□ -0.16
Col25a1Q99MQ5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.02□□□□□ -0.16
Col25a1Q99MQ5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms