Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm13786-201ENSMUST00000122371 333 ntBASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm7029-201ENSMUST00000173226 450 ntBASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm8227-201ENSMUST00000223306 571 ntBASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx6-1Q99MA9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm37489-201ENSMUST00000191883 159 ntBASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm5363-201ENSMUST00000211927 938 ntBASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx6-1Q99MA9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx6-1Q99MA9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms