Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.76□□□□□ -0.21
Cttnbp2nlQ99LJ0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cttnbp2nlQ99LJ0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cttnbp2nlQ99LJ0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cttnbp2nlQ99LJ0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm2810-201ENSMUST00000118681 990 ntBASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm29741-201ENSMUST00000192667 421 ntBASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm38225-201ENSMUST00000194001 393 ntBASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cttnbp2nlQ99LJ0 BC001981-202ENSMUST00000191393 1545 ntBASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm11594-201ENSMUST00000122313 162 ntBASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.74□□□□□ -0.21
Cttnbp2nlQ99LJ0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm6222-201ENSMUST00000120787 396 ntBASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Mir8117-201ENSMUST00000184773 107 ntBASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cttnbp2nlQ99LJ0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms