Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Gm6244-201ENSMUST00000178732 841 ntBASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Gm27892-201ENSMUST00000185017 106 ntBASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Gm42550-201ENSMUST00000201553 960 ntBASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd3Q99LE3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.08□□□□□ -0.15
Lysmd3Q99LE3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.08□□□□□ -0.15
Lysmd3Q99LE3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd3Q99LE3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd3Q99LE3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm17330-201ENSMUST00000221047 165 ntBASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd3Q99LE3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Mir1894-201ENSMUST00000122802 81 ntBASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd3Q99LE3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms