Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC21.12■□□□□ 0.97
Clip1Q922J3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Gm18935-201ENSMUST00000212692 664 ntBASIC21.12■□□□□ 0.97
Clip1Q922J3 Gm18244-201ENSMUST00000219747 1566 ntBASIC21.12■□□□□ 0.97
Clip1Q922J3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Clip1Q922J3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC21.12■□□□□ 0.97
Clip1Q922J3 Gm43579-201ENSMUST00000202387 1307 ntBASIC21.12■□□□□ 0.97
Clip1Q922J3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC21.12■□□□□ 0.97
Clip1Q922J3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip1Q922J3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
Clip1Q922J3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip1Q922J3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC21.11■□□□□ 0.97
Clip1Q922J3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC21.11■□□□□ 0.97
Clip1Q922J3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC21.11■□□□□ 0.97
Clip1Q922J3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC21.11■□□□□ 0.97
Clip1Q922J3 AC134335.2-201ENSMUST00000227660 440 ntBASIC21.11■□□□□ 0.97
Clip1Q922J3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC21.11■□□□□ 0.97
Clip1Q922J3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip1Q922J3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip1Q922J3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clip1Q922J3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Clip1Q922J3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clip1Q922J3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clip1Q922J3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Clip1Q922J3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Clip1Q922J3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip1Q922J3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Clip1Q922J3 Gm8805-201ENSMUST00000117848 313 ntBASIC21.1■□□□□ 0.97
Clip1Q922J3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC21.1■□□□□ 0.97
Clip1Q922J3 Gm37259-201ENSMUST00000193903 849 ntBASIC21.1■□□□□ 0.97
Clip1Q922J3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC21.1■□□□□ 0.97
Clip1Q922J3 AC022775.2-201ENSMUST00000227885 646 ntBASIC21.1■□□□□ 0.97
Clip1Q922J3 Gm24526-201ENSMUST00000082921 158 ntBASIC21.1■□□□□ 0.97
Clip1Q922J3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC21.1■□□□□ 0.97
Clip1Q922J3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Gm28182-201ENSMUST00000188354 2477 ntBASIC21.1■□□□□ 0.97
Clip1Q922J3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Clip1Q922J3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC21.1■□□□□ 0.97
Clip1Q922J3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Clip1Q922J3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Clip1Q922J3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Gm9431-201ENSMUST00000119765 1051 ntBASIC21.1■□□□□ 0.97
Clip1Q922J3 Gm38341-201ENSMUST00000195357 515 ntBASIC21.1■□□□□ 0.97
Clip1Q922J3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC21.1■□□□□ 0.97
Clip1Q922J3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip1Q922J3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC21.09■□□□□ 0.97
Clip1Q922J3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clip1Q922J3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC21.09■□□□□ 0.97
Clip1Q922J3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Clip1Q922J3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Gm43423-201ENSMUST00000198390 2094 ntBASIC21.09■□□□□ 0.97
Clip1Q922J3 Gm12363-201ENSMUST00000122250 668 ntBASIC21.09■□□□□ 0.97
Clip1Q922J3 Gm11978-201ENSMUST00000122315 466 ntBASIC21.09■□□□□ 0.97
Clip1Q922J3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Gm7809-201ENSMUST00000153199 742 ntBASIC21.09■□□□□ 0.97
Clip1Q922J3 Gm28693-202ENSMUST00000190758 331 ntBASIC21.09■□□□□ 0.97
Clip1Q922J3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip1Q922J3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms