Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha8Q91Y12 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Gm6912-201ENSMUST00000117218 544 ntBASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Mir7684-201ENSMUST00000183858 60 ntBASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Gm27989-201ENSMUST00000184721 107 ntBASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Gm10576-201ENSMUST00000191927 825 ntBASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha8Q91Y12 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha8Q91Y12 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms