Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb1Q91Y08 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Gm5279-201ENSMUST00000199575 745 ntBASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Gm20949-201ENSMUST00000206478 952 ntBASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Gm17330-201ENSMUST00000221047 165 ntBASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb1Q91Y08 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gm22189-201ENSMUST00000103822 86 ntBASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gm24447-201ENSMUST00000083977 338 ntBASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms