Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Gm27533-201ENSMUST00000183800 152 ntBASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Gm14701-201ENSMUST00000117156 348 ntBASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Gm15653-201ENSMUST00000119247 907 ntBASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb4Q91XZ6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Gm25948-201ENSMUST00000175334 112 ntBASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Gm27430-201ENSMUST00000184585 107 ntBASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Gm44333-201ENSMUST00000197168 107 ntBASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb4Q91XZ6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb4Q91XZ6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Pcdhb4Q91XZ6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb4Q91XZ6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb4Q91XZ6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb4Q91XZ6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb4Q91XZ6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Gm15460-201ENSMUST00000118147 391 ntBASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Gm25144-201ENSMUST00000179561 110 ntBASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Gm25352-201ENSMUST00000179815 110 ntBASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms