Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb5Q91XZ5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Gm22018-201ENSMUST00000104357 131 ntBASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb5Q91XZ5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb5Q91XZ5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb5Q91XZ5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb5Q91XZ5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms