Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H1fooQ8VIK3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H1fooQ8VIK3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.4□□□□□ -0.59
H1fooQ8VIK3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H1fooQ8VIK3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
H1fooQ8VIK3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H1fooQ8VIK3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Gm27321-201ENSMUST00000185021 205 ntBASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H1fooQ8VIK3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Gm13223-201ENSMUST00000118609 747 ntBASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H1fooQ8VIK3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms