Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf8Q8VC56 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Mir125a-201ENSMUST00000083545 68 ntBASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf8Q8VC56 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Gm12882-201ENSMUST00000121696 517 ntBASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Gm27618-201ENSMUST00000183671 60 ntBASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Gm27533-201ENSMUST00000183800 152 ntBASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Gm27306-201ENSMUST00000183970 107 ntBASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.12□□□□□ -0.31
Rnf8Q8VC56 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf8Q8VC56 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms