Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Gm28760-201ENSMUST00000185995 736 ntBASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Grk6-205ENSMUST00000224653 2976 ntBASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Gm16215-201ENSMUST00000161990 637 ntBASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Gm43094-201ENSMUST00000196549 921 ntBASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Top1mtQ8R4U6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Auts2-212ENSMUST00000178555 309 ntBASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Gm42612-201ENSMUST00000197986 623 ntBASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Gm43170-201ENSMUST00000199827 612 ntBASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Top1mtQ8R4U6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Top1mtQ8R4U6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms