Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Gm21854-201ENSMUST00000179901 471 ntBASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.9□□□□□ -0.34
Ubqln1Q8R317 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Acot6-202ENSMUST00000222921 3622 ntBASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ubqln1Q8R317 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Ubqln1Q8R317 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Mir6977-201ENSMUST00000184960 64 ntBASIC12.89□□□□□ -0.35
Ubqln1Q8R317 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubqln1Q8R317 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.88□□□□□ -0.35
Ubqln1Q8R317 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Syt7-204ENSMUST00000223586 1344 ntBASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubqln1Q8R317 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms