Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Gm6447-201ENSMUST00000118905 835 ntBASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx54Q8K4L0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Gm11531-201ENSMUST00000117614 555 ntBASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx54Q8K4L0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Gm23200-201ENSMUST00000104379 132 ntBASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Gm8385-201ENSMUST00000058999 643 ntBASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.63■□□□□ 0.41
Ddx54Q8K4L0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Gm13665-201ENSMUST00000120830 528 ntBASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Gm26361-201ENSMUST00000158868 186 ntBASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Gm19221-201ENSMUST00000221827 1477 ntBASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx54Q8K4L0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms