Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.29■□□□□ 0.2
Col23a1Q8K4G2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Gm7003-201ENSMUST00000195089 312 ntBASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col23a1Q8K4G2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm11597-201ENSMUST00000121423 964 ntBASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm12208-201ENSMUST00000122004 163 ntBASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm14665-201ENSMUST00000122294 557 ntBASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm11978-201ENSMUST00000122315 466 ntBASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm45224-201ENSMUST00000208203 414 ntBASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 AC140293.1-201ENSMUST00000225626 1247 ntBASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col23a1Q8K4G2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col23a1Q8K4G2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col23a1Q8K4G2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col23a1Q8K4G2 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.27■□□□□ 0.19
Col23a1Q8K4G2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col23a1Q8K4G2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.26■□□□□ 0.19
Col23a1Q8K4G2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms