Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
Clrn1Q8K445 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Clrn1Q8K445 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.83□□□□□ -0.35
Clrn1Q8K445 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Gm27772-201ENSMUST00000184900 187 ntBASIC12.83□□□□□ -0.36
Clrn1Q8K445 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Gm44487-201ENSMUST00000205145 325 ntBASIC12.83□□□□□ -0.36
Clrn1Q8K445 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.83□□□□□ -0.36
Clrn1Q8K445 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn1Q8K445 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.82□□□□□ -0.36
Clrn1Q8K445 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Gm15770-201ENSMUST00000117498 584 ntBASIC12.82□□□□□ -0.36
Clrn1Q8K445 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Mir6977-201ENSMUST00000184960 64 ntBASIC12.82□□□□□ -0.36
Clrn1Q8K445 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.82□□□□□ -0.36
Clrn1Q8K445 Gm44855-201ENSMUST00000205725 362 ntBASIC12.82□□□□□ -0.36
Clrn1Q8K445 Gm7730-201ENSMUST00000212486 454 ntBASIC12.82□□□□□ -0.36
Clrn1Q8K445 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn1Q8K445 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms