Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtn1Q8K0T0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gm17330-201ENSMUST00000221047 165 ntBASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtn1Q8K0T0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Gm12341-201ENSMUST00000119724 503 ntBASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Gm37917-201ENSMUST00000194711 392 ntBASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Gm5161-201ENSMUST00000075243 853 ntBASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Gm24447-201ENSMUST00000083977 338 ntBASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtn1Q8K0T0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Gm18624-201ENSMUST00000220966 658 ntBASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms