Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gm38671-201ENSMUST00000200573 130 ntBASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gm45841-201ENSMUST00000207700 164 ntBASIC15.8■□□□□ 0.12
Alx1Q8C8B0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Gm10156-201ENSMUST00000122364 462 ntBASIC15.79■□□□□ 0.12
Alx1Q8C8B0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Gm8652-201ENSMUST00000181363 964 ntBASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.79■□□□□ 0.12
Alx1Q8C8B0 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.79■□□□□ 0.12
Alx1Q8C8B0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx1Q8C8B0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Proscos-202ENSMUST00000178990 666 ntBASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Gm24196-201ENSMUST00000179161 110 ntBASIC15.78■□□□□ 0.12
Alx1Q8C8B0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.78■□□□□ 0.12
Alx1Q8C8B0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx1Q8C8B0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms