Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Gm10156-201ENSMUST00000122364 462 ntBASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Gm40466-201ENSMUST00000212174 422 ntBASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Gm8213-201ENSMUST00000118191 441 ntBASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh3rf2Q8BZT2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Gm8062-201ENSMUST00000139696 444 ntBASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Gm37424-201ENSMUST00000191727 561 ntBASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Gm43818-201ENSMUST00000200605 466 ntBASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.73□□□□□ -0.21
Sh3rf2Q8BZT2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms