Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Gm11478-201ENSMUST00000117851 599 ntBASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nup54Q8BTS4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nup54Q8BTS4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms