Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Gm23200-201ENSMUST00000104379 132 ntBASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Gm13875-201ENSMUST00000120162 282 ntBASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Gm14277-201ENSMUST00000121195 360 ntBASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Gm44775-201ENSMUST00000207266 1456 ntBASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Gm2546-201ENSMUST00000182630 991 ntBASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col16a1Q8BLX7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Col16a1Q8BLX7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Col16a1Q8BLX7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Col16a1Q8BLX7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.46■□□□□ 0.38
Col16a1Q8BLX7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms