Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chd4Q6PDQ2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chd4Q6PDQ2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chd4Q6PDQ2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd4Q6PDQ2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Gm12012-201ENSMUST00000118857 1066 ntBASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Mospd4-201ENSMUST00000180618 576 ntBASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd4Q6PDQ2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms