Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShbQ6PD21 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShbQ6PD21 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShbQ6PD21 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShbQ6PD21 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShbQ6PD21 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ShbQ6PD21 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShbQ6PD21 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.47□□□□□ -0.09
ShbQ6PD21 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShbQ6PD21 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShbQ6PD21 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ShbQ6PD21 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
ShbQ6PD21 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ShbQ6PD21 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Gm14665-201ENSMUST00000122294 557 ntBASIC14.46□□□□□ -0.09
ShbQ6PD21 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.46□□□□□ -0.09
ShbQ6PD21 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
ShbQ6PD21 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.46□□□□□ -0.09
ShbQ6PD21 Gm45224-201ENSMUST00000208203 414 ntBASIC14.46□□□□□ -0.09
ShbQ6PD21 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.46□□□□□ -0.09
ShbQ6PD21 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.46□□□□□ -0.09
ShbQ6PD21 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ShbQ6PD21 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.46□□□□□ -0.1
ShbQ6PD21 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ShbQ6PD21 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ShbQ6PD21 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ShbQ6PD21 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ShbQ6PD21 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.45□□□□□ -0.1
ShbQ6PD21 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ShbQ6PD21 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ShbQ6PD21 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ShbQ6PD21 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ShbQ6PD21 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.45□□□□□ -0.1
ShbQ6PD21 Gm25043-201ENSMUST00000158604 212 ntBASIC14.45□□□□□ -0.1
ShbQ6PD21 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ShbQ6PD21 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.45□□□□□ -0.1
ShbQ6PD21 Gm44551-201ENSMUST00000208804 171 ntBASIC14.45□□□□□ -0.1
ShbQ6PD21 Gm5904-201ENSMUST00000210286 865 ntBASIC14.45□□□□□ -0.1
ShbQ6PD21 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.45□□□□□ -0.1
ShbQ6PD21 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.45□□□□□ -0.1
ShbQ6PD21 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ShbQ6PD21 Daam2-202ENSMUST00000224595 1926 ntBASIC14.45□□□□□ -0.1
ShbQ6PD21 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.44□□□□□ -0.1
ShbQ6PD21 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ShbQ6PD21 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ShbQ6PD21 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ShbQ6PD21 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ShbQ6PD21 Gm12058-201ENSMUST00000118614 437 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.44□□□□□ -0.1
ShbQ6PD21 Gm17040-202ENSMUST00000170597 889 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms