Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Gm15487-201ENSMUST00000122373 465 ntBASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Gm27989-201ENSMUST00000184721 107 ntBASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sp140Q6NSQ5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Gm9522-201ENSMUST00000182394 926 ntBASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sp140Q6NSQ5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sp140Q6NSQ5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms